I currently work as a Data Scientist (Bioinformatics) at the Joint Genome Institute at Lawrence Berkeley National Laboratory where I develop analysis pipelines and tools for epigenomic experiments (chIP-seq, methyl-seq, RNA-seq).
Vitamin C induced epigenomic remodelling in IDH1 mutant acute myeloid leukaemia Nature Leukemia
Figure 2. Vitamin C induces methylome remodelling in IDH1 R132H expressing cells
Figure 3. Vitamin C treatment leads to demethylation at enhancers that become active in the myeloid lineage specifically
Epigenetic and transcriptional determinants of the human breast Nature Communications
Figure 2. Intron retention and mammary cell type-specific miRNAs and long noncoding RNAs.
Figure 3. Regulatory asymmetry between myoepithelial and luminal cell types.
Epigenetic therapy restores normal hematopoiesis in a zebrafish model of NUP98–HOXA9 induced myeloid disease Nature Leukemia
Figure 3. Microarray analysis identifies overexpression of DNMT1.
Figure 4. DAC and Indo function synergistically with VPA to restore hematopoiesis in NHA9 transgenic zebrafish